Journal Article

·2018 OPEN ACCESS

Autonomous Synthesis of Fluorescent Silica Biodots Using Engineered Fusion Proteins

Tolga T. Ölmez , Esra Yuca YTU , Erol Eyüpoğlu , Hazal B. Catalak , Özgür Şahin , Urartu Özgür Şafak Şeker

ACS Omega

Abstract

Formation of biological materials is a well-controlled process that is orchestrated by biomolecules such as proteins. Proteins can control the nucleation and mineralization of biomaterials, thereby forming the hard tissues of biological organisms, such as bones, teeth, and shells. In this study, the design and implementation of multifunctional designer proteins are demonstrated for fluorescent silica micro/nanoparticle synthesis. The R5 motif of silaffin polypeptide, which is known for its silicification capability, was fused genetically into three spectrally distinct fluorescent proteins with the intention of forming modified fluorescent proteins. The bifunctional R5 peptide domain served as a tag to provide silica synthesis at ambient conditions. Three functional fusion constructs have been prepared, including GFPmut3-R5, Venus YFP-R5, and mCherry-R5. Recombinant fluorescent proteins were purified using silica-binding peptide tag through silica gel resin. Purified proteins were tested for their binding affinity to silica using quartz crystal microbalance with dissipation monitoring to make sure they can interact strong enough with the silica surfaces. Later, engineered fluorescent proteins were used to synthesize silica nano/microparticles using silica precursor materials. Synthesized silica particles were investigated for their fluorescence properties, including time-resolved fluorescence. Additionally, elemental analysis of the particles was carried out using electron energy loss spectroscopy and energy-filtered transmission electron microscopy. Last, they were tested for their biocompatibility. In this study, we aimed to provide a biomimetic route to synthesize fluorescent silica nanoparticles. Recombinant fluorescent proteins-directed silica nanoparticles synthesis offers a one-step, reliable method to produce fluorescent particles both for biomaterial applications and other nanotechnology applications.

Keywords

mCherry Fluorescence Biomolecule Fusion protein Silicon dioxide Nanoparticle Quartz crystal microbalance Chemistry Green fluorescent protein Biocompatibility Biophysics Materials science Nanotechnology Recombinant DNA Biochemistry Organic chemistry

Subject Areas

Diatoms and Algae Research ·Biomaterials ·Physical Sciences
Advanced biosensing and bioanalysis techniques ·Molecular Biology ·Life Sciences
Bone Tissue Engineering Materials ·Biomedical Engineering ·Physical Sciences

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